Signature	SharedGeneNum	SharedGenes	AvgPval	ColonC_M19 ChrX_UniqueNum	ColonC_M19 ChrX_pVal	ColonC_M19 ChrX_Unique	ColonC_M19 ChrX_UniqueNum	ColonC_M19 ChrX_pVal	ColonC_M19 ChrX_Unique
ATGGYGGA_UNKNOWN	10	ARMCX6|DLG3|GABPB2|GLA|HNRNPH2|NONO|PRPS1|SH3KBP1|STAG2|XIAP	6.77405083578e-06	0	6.77405083578e-06		0	6.77405083578e-06	
BIDUS_METASTASIS_UP	16	DKC1|ERCC6L|FSD1L|HMGB3|HUWE1|KDM6A|KIF4A|MED14|NONO|PSMD10|RLIM|SMC1A|SMS|UBQLN2|USP9X|VBP1	7.98151450605e-07	0	7.98151450605e-07		0	7.98151450605e-07	
BILANGES_RAPAMYCIN_SENSITIVE_VIA_TSC1_AND_TSC2	7	EIF2S3|IGBP1|NAA10|PGK1|SLC25A3|SLC25A5|SSR4	0.000121834682163	0	0.000121834682163		0	0.000121834682163	
BORCZUK_MALIGNANT_MESOTHELIOMA_UP	22	DKC1|DYNLT3|FTSJ1|HPRT1|LAMP2|MAGED1|MAGED2|PGK1|PGRMC1|PRDX4|PRPS2|PSMD10|RP2|RPS6KA3|SLC25A3|SMC1A|UBE2A|UBE2D1|UBQLN2|USP9X|VAMP7|VBP1	1.49855943241e-08	0	1.49855943241e-08		0	1.49855943241e-08	
Blood_Module-3.6_Undetermined	12	AMMECR1|ATP11C|C1GALT1C1|FUNDC1|PHF6|RPS6KA3|SCFD2|SH3KBP1|THOC2|TXLNG|USP9X|VBP1	0.000775883898913	0	0.000775883898913		0	0.000775883898913	
CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN	15	ALG13|APOO|C1GALT1C1|FUNDC1|MAGED1|MCTS1|MMGT1|NONO|PGK1|PRDX4|PRPS1|PSMD10|SLC25A5|UXT|VBP1	9.10461649426e-07	0	9.10461649426e-07		0	9.10461649426e-07	
CHIARADONNA_NEOPLASTIC_TRANSFORMATION_CDC25_UP	10	CASK|CXORF38|GPC4|HTATSF1|LAMP2|MAGED1|PDK3|PGRMC1|RBM3|UTP14A	4.17657598208e-05	0	4.17657598208e-05		0	4.17657598208e-05	
Chiche(PMID: 24644022)-2014_M5.2	6	ATP11C|HNRNPH2|MCTS1|NXT2|SPIN4|SYAP1	0.000418845726851	0	0.000418845726851		0	0.000418845726851	
DAIRKEE_TERT_TARGETS_UP	17	ARHGEF9|CCNQ|CDK16|EBP|EMD|FAM3A|FUNDC2|HPRT1|IDH3G|IKBKG|NAA10|NDUFB11|PGRMC1|PIR|PQBP1|SLC38A5|SSR4	0.000139898353417	0	0.000139898353417		0	0.000139898353417	
DISTECHE_ESCAPED_FROM_X_INACTIVATION	10	DDX3X|EIF1AX|EIF2S3|KDM5C|KDM6A|PRKX|TMSB4X|UBA1|USP9X|ZFX	6.17592530586e-16	0	6.17592530586e-16		0	6.17592530586e-16	
E2F_Q3	12	ATRX|EIF1AX|FAM120C|POLA1|PRPS1|RBBP7|SLC25A3|SLC25A14|SMC1A|STAG2|TREX2|UXT	0.000484109902882	0	0.000484109902882		0	0.000484109902882	
ERR1_Q2	13	AIFM1|ATP6AP2|COX7B|FAM122C|HTATSF1|IDH3G|KDM5C|PHF6|RAP2C|RNF128|SLC25A5|SSR4|TAB3	0.00037257353707	0	0.00037257353707		0	0.00037257353707	
GAUSSMANN_MLL_AF4_FUSION_TARGETS_A_UP	13	ATP7A|CA5B|DYNLT3|GLA|HUWE1|KDM5C|MBTPS2|MOSPD2|RP2|RPGR|SH3KBP1|SYAP1|TSR2	2.16079685186e-05	0	2.16079685186e-05		0	2.16079685186e-05	
GCCATNTTG_YY1_Q6	20	ATRX|COX7B|DDX3X|FAM120C|IDH3G|IRAK1|IRX5|KDM6A|MAGT1|NDUFB11|PRICKLE3|RBM3|RBM10|RLIM|RPS6KA3|SSR4|UBA1|UPF3B|WDR13|ZFX	2.82015157878e-05	0	2.82015157878e-05		0	2.82015157878e-05	
GCTGAGT_MIR5125P	6	ATRX|PHF6|SLC10A3|TAB3|TAZ|ZDHHC9	0.00022373553258	0	0.00022373553258		0	0.00022373553258	
GGGYGTGNY_UNKNOWN	25	ARMCX6|CDK16|ELF4|GPC4|HSD17B10|KIF4A|LAMP2|MAGED2|PDZD11|PLP2|PLXNA3|POF1B|PRRG1|RAP2C|RBBP7|RBM3|RPS6KA3|SCML2|SH3KBP1|STAG2|SUV39H1|UTP14C|XK|ZFX|ZMYM3	0.000150875245534	0	0.000150875245534		0	0.000150875245534	
GRADE_COLON_AND_RECTAL_CANCER_UP	14	ADGRG1|ATP6AP2|GYG2|IRAK1|MAGED2|MBTPS2|NONO|PDK3|PRDX4|RLIM|SYAP1|USP9X|VBP1|ZDHHC9	0.000382220510399	0	0.000382220510399		0	0.000382220510399	
GSE360_DC_VS_MAC_B_MALAYI_LOW_DOSE_DN	11	CETN2|EIF1AX|MAGED1|MTMR1|PIGA|PLP2|PRDX4|PRRG1|RYR2|SLC10A3|SLC25A3	0.00064884782845	0	0.00064884782845		0	0.00064884782845	
GSE1460_DP_THYMOCYTE_VS_NAIVE_CD4_TCELL_ADULT_BLOOD_UP	11	HMGB3|JADE3|KIF4A|MAGED1|MCTS1|MED12|PUDP|SLC25A14|TMEM164|UBA1|USP11	0.00064884782845	0	0.00064884782845		0	0.00064884782845	
GSE1460_DP_THYMOCYTE_VS_NAIVE_CD4_TCELL_CORD_BLOOD_UP	11	HMGB3P1|HTATSF1|MAGED1|MBTPS2|MTMR1|NUP62CL|PGRMC1|PUDP|RBBP7|SLC25A14|TCEAL9	0.000545851601298	0	0.000545851601298		0	0.000545851601298	
GSE2770_IL12_AND_TGFB_VS_IL4_TREATED_ACT_CD4_TCELL_6H_UP	11	APOOL|CA5B|CUL4B|KIF4A|LAS1L|NKAP|NXT2|RAB9A|SCMH1|STAG2|TIMM17B	0.000706124686863	0	0.000706124686863		0	0.000706124686863	
GSE2770_TGFB_AND_IL4_VS_IL4_TREATED_ACT_CD4_TCELL_6H_UP	12	CASK|CHM|GRIPAP1|MCTS1|MID1|NDUFA1|OFD1|RBM41|SMC1A|SPIN3|TCEAL1|THOC2	0.000124875156784	0	0.000124875156784		0	0.000124875156784	
GSE10240_CTRL_VS_IL22_STIM_PRIMARY_BRONCHIAL_EPITHELIAL_CELLS_DN	11	APEX2|ERCC6L|GRIPAP1|HERC2|MED12|MTMR1|NXT2|PIR|PKD2L2|WDR45|ZBTB33	0.000621694191427	0	0.000621694191427		0	0.000621694191427	
GSE10240_IL22_VS_IL17_STIM_PRIMARY_BRONCHIAL_EPITHELIAL_CELLS_UP	11	CCNQ|CUL4B|G6PD|MOSPD2|NKRF|PKD2L2|RAB9A|RP2|RPGR|SLC10A3|YIPF6	0.000570222197636	0	0.000570222197636		0	0.000570222197636	
GSE13493_CD4INTCD8POS_VS_CD8POS_THYMOCYTE_UP	13	ARMCX3|ATP7A|ATP11C|ELF4|FMR1|LAGE3|NXT2|PBDC1|RAP2C|TAF9B|VAMP7|WDR45|ZBTB33	3.5686370563e-05	0	3.5686370563e-05		0	3.5686370563e-05	
GSE16450_CTRL_VS_IFNA_12H_STIM_IMMATURE_NEURON_CELL_LINE_UP	12	CASK|CTPS2|CXORF57|DIAPH2|HERC2|MBTPS2|METTL2B|POLA1|PUDP|SCFD2|SPIN3|XIST	0.000175678720073	0	0.000175678720073		0	0.000175678720073	
GSE16522_MEMORY_VS_NAIVE_CD8_TCELL_UP	11	CA5B|FUNDC1|IKBKG|MOSPD2|MTMR1|OFD1|PHF8|PLS3|SYAP1|TAZ|TCEANC	0.000736303121724	0	0.000736303121724		0	0.000736303121724	
GSE17721_CPG_VS_GARDIQUIMOD_6H_BMDC_DN	11	AIFM1|MSL3|RNF128|SNX12|TAZ|TCEAL8|TIMM8A|TMEM185A|UBE2A|UPF3B|USP11	0.000522357262753	0	0.000522357262753		0	0.000522357262753	
GSE18804_BRAIN_VS_COLON_TUMORAL_MACROPHAGE_UP	14	ARMCX5|ASB9|F8|FUNDC1|KDM6A|MSL3|NKAP|PIGA|PRRG1|PUDP|RAB9A|SSR4|TMEM185A|VAMP7	4.17663682169e-06	0	4.17663682169e-06		0	4.17663682169e-06	
GSE22886_DAY0_VS_DAY7_MONOCYTE_IN_CULTURE_DN	11	APOO|ATP6AP1|BCAP31|EBP|G6PD|LAGE3|MOSPD1|NDUFA1|PDHA1|PJA1|PRDX4	0.000736303121724	0	0.000736303121724		0	0.000736303121724	
GSE25085_FETAL_LIVER_VS_ADULT_BM_SP4_THYMIC_IMPLANT_DN	11	BCAP31|EBP|ERCC6L|FAM122B|GEMIN8|HMGB3|IDH3G|PLP2|POLA1|SLC9A6|SUV39H1	0.000595494436388	0	0.000595494436388		0	0.000595494436388	
GSE31082_DP_VS_CD4_SP_THYMOCYTE_UP	11	ATP6AP2|BRCC3|EIF1AX|ERCC6L|HCCS|JADE3|NKAP|POLA1|TCEAL9|UBE2A|ZBTB33	0.000456885226855	0	0.000456885226855		0	0.000456885226855	
GSE37301_MULTIPOTENT_PROGENITOR_VS_PRO_BCELL_DN	10	ARMCX3|CD99L2|DNASE1L1|GLA|PGRMC1|PLS3|SLC9A6|SNX12|VAMP7|ZMYM3	0.000982130476427	0	0.000982130476427		0	0.000982130476427	
GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_UP	15	ARMCX5|ASB9|CETN2|DPY19L2P2|MSL3|OFD1|PUDP|RAB9A|RBBP7|SMS|TXLNG|VAMP7|VMA21|WDR13|XK	5.97773327757e-07	0	5.97773327757e-07		0	5.97773327757e-07	
GSE37416_CTRL_VS_6H_F_TULARENSIS_LVS_NEUTROPHIL_UP	12	ATP6AP2|BCAP31|CUL4B|FUNDC1|G6PD|JPX|LAMP2|MSL3|MTM1|NAA10|SLC25A3|ZNF75D	0.000107315088124	0	0.000107315088124		0	0.000107315088124	
GSE39820_CTRL_VS_IL1B_IL6_CD4_TCELL_UP	11	ATP11C|CUL4B|DDX3X|ERCC6L|KDM5C|KDM6A|MID1|NSDHL|PBDC1|STAG2|XIST	0.000545851601298	0	0.000545851601298		0	0.000545851601298	
GSE39820_CTRL_VS_TGFBETA1_IL6_IL23A_CD4_TCELL_UP	11	ABCB7|CXORF38|EIF2S3|KDM6A|MID1|PRPS2|SLC25A3|SPIN4|STK26|USP9X|XIAP	0.000595494436388	0	0.000595494436388		0	0.000595494436388	
GSE40274_CTRL_VS_FOXP3_AND_HELIOS_TRANSDUCED_ACTIVATED_CD4_TCELL_DN	11	APOO|ARMCX3|FTSJ1|MAGT1|NSDHL|PGK1|PLP2|PRDX4|PRPS1|SCFD2|SSR4	0.000570222197636	0	0.000570222197636		0	0.000570222197636	
GSE41176_UNSTIM_VS_ANTI_IGM_STIM_TAK1_KO_BCELL_6H_UP	11	ARMCX5|F8|FAM3A|FUNDC1|MBTPS2|MECP2|RNF113A|TSPYL2|WDR13|WDR45|ZFYVE9	0.000499714283922	0	0.000499714283922		0	0.000499714283922	
GSE42724_MEMORY_BCELL_VS_PLASMABLAST_DN	11	HPRT1|IDH3G|NBDY|NONO|PDHA1|PHKA1|PHKA2|PRPS2|PRRG1|RPS6KA3|TCEAL1	0.000676982207912	0	0.000676982207912		0	0.000676982207912	
GSE45365_CD8A_DC_VS_CD11B_DC_IFNAR_KO_UP	12	ARMCX3|FMR1|PLS3|PUDP|RAB9A|RBBP7|SMS|TMEM185A|TRAPPC2|USP9X|VAMP7|XK	0.000124875156784	0	0.000124875156784		0	0.000124875156784	
HALLMARK_OXIDATIVE_PHOSPHORYLATION	11	ABCB7|AIFM1|ATP6AP1|COX7B|HCCS|HSD17B10|IDH3G|NDUFA1|PDHA1|SLC25A3|SLC25A5	0.000363060774859	0	0.000363060774859		0	0.000363060774859	
HALLMARK_PROTEIN_SECRETION	8	ATP7A|GLA|LAMP2|OCRL|RAB9A|RPS6KA3|VAMP7|YIPF6	0.000274882976089	0	0.000274882976089		0	0.000274882976089	
Human Bone_Man05_45genes (16166288-Table4)	5	CMC4|GDI1|HSD17B10|PRICKLE3|UBE2A	0.000700571093172	0	0.000700571093172		0	0.000700571093172	
Human Breast_Wang05_469genes_down_BT-BAF57cells (16135788-Table24)	19	ACOT9|APOO|ATRX|COX7B|DYNLT3|EBP|EIF1AX|ERCC6L|GLA|HCCS|MID1|PDHA1|PIGA|PRAME|RAB9A|RP2|SCML1|SMS|WWC3	2.80446590582e-05	0	2.80446590582e-05		0	2.80446590582e-05	
Human HeadandNeck_Rickman08_19genes (18679425-Table3)	6	ALG13|ARMCX5|BHLHB9|PSMD10|VAMP7|YIPF6	4.17912968295e-07	0	4.17912968295e-07		0	4.17912968295e-07	
Human Leukemia_Calln08_1020genes (18362358-Table7)	27	ABCB7|ARMCX3|ATP11C|ATRX|BRCC3|DDX3X|DYNLT3|FAM199X|IL13RA1|KDM6A|MBTPS2|MMGT1|MOSPD1|NKRF|NXT2|PGK1|PRKX|PSMD10|SCML1|SLC9A6|STAG2|TXLNG|VBP1|VMA21|XIAP|XK|ZFX	2.88392112687e-05	0	2.88392112687e-05		0	2.88392112687e-05	
Human Leukemia_Kiiveri08_100genes_Hyperdiploid &gt;50Parallel (18410693-TableS11)	42	ABCB7|APOOL|ATP6AP2|ATP11C|ATRX|CCDC22|CUL4B|FAM122B|FTSJ1|GPKOW|HCCS|HNRNPH2|HUWE1|LAS1L|MBTPS2|MED12|MORC4|MTMR1|PDHA1|PGK1|PIN4|PLP2|PQBP1|PRDX4|PSMD10|PUDP|RAB9A|RBBP7|RNF113A|RPS6KA3|SCML2|SH3KBP1|STAG2|TAF9B|TCEAL1|TCEAL4|UBE2A|UBQLN2|UPF3B|USP9X|VAMP7|ZXDB	3.77880033512e-52	0	3.77880033512e-52		0	3.77880033512e-52	
Human Leukemia_Kiiveri08_100genes_Hyperdiploid &gt;50Tree (18410693-TableS5)	38	ADGRG1|ATP6AP2|ATRX|CUL4B|EIF1AX|FTSJ1|HAUS7|HCCS|HMGB3|HNRNPH2|HPRT1|HTATSF1|HUWE1|LAMP2|MCTS1|MED12|MORC4|PDHA1|PGK1|PLP2|POLA1|PRDX4|PRPS1|PSMD10|RBBP7|RNF113A|RP2|SH3KBP1|SLC9A6|TCEAL4|UBE2A|UBQLN2|UPF3B|UPRT|USP9X|UXT|VAMP7|VBP1	2.7543729958e-44	0	2.7543729958e-44		0	2.7543729958e-44	
Human Leukemia_Lilljebjorn07_10genes (17690704-SuppTable1)	6	FAM50A|HMGB3|HTATSF1|RAP2C|VMA21|ZNF275	1.85354245801e-10	0	1.85354245801e-10		0	1.85354245801e-10	
Human Leukemia_Yeoh02_96genes (12086872-Table12c)	8	BCAP31|CMC4|HUWE1|PSMD10|RPS6KA3|SCML2|SMS|STAG2	0.000150259729358	0	0.000150259729358		0	0.000150259729358	
Human Lung_Daniel09_177genes (19351829-SuppTableC)	11	ARSD|CASK|CENPI|FMR1|KDM6A|MAGED1|MED14|PNPLA4|POLA1|USP9X|XIAP	0.000111723475441	0	0.000111723475441		0	0.000111723475441	
Human LymphaticEndothelialCells_Norrmen09_56genes (19965622-TableS2a)	6	HAUS7|NAA10|NDUFB11|NSDHL|PQBP1|UXT	0.000309390951075	0	0.000309390951075		0	0.000309390951075	
Human LymphaticEndothelialCells_Norrmen09_107genes (19965622-TableS1a)	8	ATRX|HAUS7|MAGED1|NAA10|NDUFB11|NSDHL|PQBP1|UXT	0.000204901276573	0	0.000204901276573		0	0.000204901276573	
Human Lymphoma_Sriuranpong04_670genes_Epithelium(N)Metaplastic_DisplasticLesions(R)Carcinoma(T) (15297395-SuppTable1)	18	CETN2|FAM122B|GPC4|IDH3G|IL13RA1|MAGED2|MCTS1|MED14|OFD1|PDK3|RBMX2|RPGR|SLC10A3|TMEM164|TMEM185A|TMSB4X|UBQLN2|UPRT	0.000867518851973	0	0.000867518851973		0	0.000867518851973	
Human Lymphoma_Staege08_35genes (18400362-Figure2b)	13	C1GALT1C1|CUL4B|IL13RA1|LAMP2|MCTS1|NDUFA1|NKRF|PGRMC1|RNF113A|SLC25A5|UBE2A|UPF3B|ZBTB33	2.66878965765e-19	0	2.66878965765e-19		0	2.66878965765e-19	
Human Prostate_Nadiminty06_50genes_UpRegulated (16533764-Table1)	7	ABCB7|DDX3X|HUWE1|SLC25A5|TAF1|UBA1|USP9X	1.83242812819e-05	0	1.83242812819e-05		0	1.83242812819e-05	
IWANAGA_CARCINOGENESIS_BY_KRAS_PTEN_UP	10	CLDN2|CUL4B|ERCC6L|GLA|IGBP1|LAMP2|MTM1|PGK1|RNF128|RPGR	0.000785445841854	0	0.000785445841854		0	0.000785445841854	
KIM_MYC_AMPLIFICATION_TARGETS_UP	12	AIFM1|COX7B|DKC1|HPRT1|MCTS1|PDHA1|PGRMC1|PHKA1|PRPS1|PRRG1|SLC25A5|XIST	0.000107315088124	0	0.000107315088124		0	0.000107315088124	
KRIEG_KDM3A_TARGETS_NOT_HYPOXIA	11	ALG13|AMMECR1|ATP6AP2|CSTF2|CXORF57|HPRT1|NBDY|PGRMC1|SLC25A14|TCTEX1D2|VBP1	0.000456885226855	0	0.000456885226855		0	0.000456885226855	
LAIHO_COLORECTAL_CANCER_SERRATED_DN	7	CDK16|FMR1|HUWE1|KDM5C|MED12|MED14|PHF8	0.000455104477398	0	0.000455104477398		0	0.000455104477398	
LOPEZ_MBD_TARGETS_IMPRINTED_AND_X_LINKED	10	ABCD1|EIF1AX|FAM3A|IDH3G|IRAK1|MTM1|NXT2|PDHA1|UBA1|UBE2A	1.65081603612e-14	0	1.65081603612e-14		0	1.65081603612e-14	
Lys63-specific deubiquitinase activity [GoID:GO:0061578; evidenceTypes:IDA|ISS|TAS]	3	BRCC3|OTUD5|USP27X	0.000576065329983	0	0.000576065329983		0	0.000576065329983	
MIKKELSEN_ES_ICP_WITH_H3K4ME3	24	APOOL|ARHGEF9|CD99L2|CHM|CLCN5|CUL4B|CXORF40A|DNASE1L1|DYNLT3|FAM3A|FAM122B|FTSJ1|FUNDC1|FUNDC2|IGBP1|MCTS1|MOSPD1|PIR|RBM41|RP2|SCML2|TCEAL1|TCEAL8|ZNF182	0.000539702281374	0	0.000539702281374		0	0.000539702281374	
MIKKELSEN_NPC_ICP_WITH_H3K4ME3	20	APOOL|ARHGEF9|CD99L2|CHM|CLCN5|CXORF40A|DNASE1L1|DYNLT3|FAM3A|FAM122B|FTSJ1|FUNDC1|FUNDC2|IGBP1|MCTS1|MOSPD1|RBM41|RP2|TCEAL8|ZNF182	3.98656297926e-05	0	3.98656297926e-05		0	3.98656297926e-05	
MILI_PSEUDOPODIA_HAPTOTAXIS_UP	29	ABCB7|ARMCX3|ATRX|BCLAF3|BHLHB9|CSTF2|CUL4B|DKC1|DLG3|DYNLT3|EIF1AX|HNRNPH2|HTATSF1|NXT2|POLA1|RAP2C|RBM41|RP2|RPS6KA3|STAG2|TBC1D8B|TCTEX1D2|TIMM8A|TMLHE|TRAPPC2|UTP14A|VAMP7|VBP1|ZRSR2	2.13836347354e-08	0	2.13836347354e-08		0	2.13836347354e-08	
MODULE_17	16	CDK16|COX7B|EBP|EIF2S3|GJB1|HPRT1|HSD17B10|IGBP1|KDM5C|PRAME|RBBP7|SMC1A|SMS|TIMM17B|VAMP7|VBP1	0.000619426825616	0	0.000619426825616		0	0.000619426825616	
MODULE_62	7	ATP6AP1|COX7B|NDUFA1|SLC9A6|SLC25A3|SLC25A5|TIMM17B	0.000279590674411	0	0.000279590674411		0	0.000279590674411	
MOOTHA_HUMAN_MITODB_6_2002	19	ABCB7|ACOT9|AIFM1|BEX3|CA5B|COX7B|HCCS|HTATSF1|IDH3G|NDUFA1|PDHA1|PDK3|PIN4|SLC9A6|SLC25A3|SLC25A5|SLC25A14|TIMM8A|TIMM17B	8.84604242796e-05	0	8.84604242796e-05		0	8.84604242796e-05	
MOOTHA_MITOCHONDRIA	21	ABCB7|ACOT9|AIFM1|BEX3|CA5B|COX7B|FAM3A|G6PD|HCCS|HTATSF1|NDUFA1|PDHA1|PDK3|PIN4|PLA2G1B|SLC9A6|SLC25A3|SLC25A5|SLC25A14|TIMM8A|TIMM17B	1.8350552127e-05	0	1.8350552127e-05		0	1.8350552127e-05	
MORF_EI24	9	BCAP31|DKC1|HCCS|IDH3G|NAA10|NSDHL|PRDX4|PRPS2|VBP1	0.000643730610402	0	0.000643730610402		0	0.000643730610402	
MORF_RAC1	14	ATP6AP1|BCAP31|CDK16|FMR1|HTATSF1|IDH3G|NONO|NSDHL|PGRMC1|PRDX4|SLC10A3|SSR4|UBA1|UBE2A	1.30034253609e-05	0	1.30034253609e-05		0	1.30034253609e-05	
MORF_RAD23A	16	ATP6AP1|BCAP31|DKC1|EIF1AX|HCCS|IDH3G|IRAK1|LAGE3|NAA10|NONO|NSDHL|PRPS2|SLC25A3|SMC1A|TREX2|VBP1	0.000263630427449	0	0.000263630427449		0	0.000263630427449	
MORF_UBE2N	7	DKC1|EIF1AX|HCCS|NONO|PRPS2|SLC25A3|VBP1	0.000996939769952	0	0.000996939769952		0	0.000996939769952	
Mental retardation	46	AIFM1|AMMECR1|ATP6AP2|ATRX|BCAP31|BRWD3|CASK|CCDC22|CUL4B|DDX3X|DLG3|EIF2S3|FMR1|FTSJ1|GDI1|HDAC8|HERC2|HNRNPH2|HSD17B10|HUWE1|IGBP1|IRX5|KDM5C|KDM6A|KLHL15|LAS1L|MECP2|MED12|NONO|NSDHL|PHF6|PHF8|PQBP1|PRPS1|RLIM|RPS6KA3|SLC9A6|SMC1A|SMS|TAF1|THOC2|UBE2A|UPF3B|USP9X|USP27X|ZDHHC9	2.82857737285e-27	0	2.82857737285e-27		0	2.82857737285e-27	
Mitochondrion inner membrane	14	ABCB7|AIFM1|APOO|APOOL|COX7B|HCCS|NDUFA1|NDUFB11|SLC25A3|SLC25A5|SLC25A14|SLC25A43|TIMM8A|TIMM17B	0.000103205004121	0	0.000103205004121		0	0.000103205004121	
Monti (PMID:15550490)_BCR	22	CENPI|CSTF2|CTPS2|DDX3X|F8A3|HMGB3|HUWE1|MED12|MSL3|MTMR1|NONO|PDHA1|PLXNA3|RBM10|RLIM|SLC25A5|SMC1A|SMS|UBA1|UBE2A|USP11|XIST	0.000291614765405	0	0.000291614765405		0	0.000291614765405	
Monti (PMID:15550490)_OXYPHOS	21	ARMCX3|ATRX|CETN2|COX7B|CXORF40A|DKC1|EIF1AX|HNRNPH2|HPRT1|HSD17B10|JADE3|MCTS1|NXT2|PGK1|PRDX4|PUDP|RBBP7|SSR4|STAG2|TIMM8A|VBP1	6.21800113511e-05	0	6.21800113511e-05		0	6.21800113511e-05	
PYEON_CANCER_HEAD_AND_NECK_VS_CERVICAL_UP	21	CASK|CENPI|DDX3X|FAM50A|FAM199X|FMR1|HMGB3|JPX|KDM6A|NUP62CL|PIGA|POLA1|PRKX|PRPS2|SCML1|TSIX|UPF3B|XIST|XK|ZFX|ZRSR2	1.39256330732e-11	0	1.39256330732e-11		0	1.39256330732e-11	
Premature ovarian failure	3	DIAPH2|FMR1|POF1B	0.000576065329983	0	0.000576065329983		0	0.000576065329983	
REN_ALVEOLAR_RHABDOMYOSARCOMA_DN	23	AMMECR1|ATP6AP1|ATP6AP2|BCAP31|C1GALT1C1|CUL4B|DYNLT3|EBP|ELF4|FTSJ1|IL13RA1|IRAK1|LAMP2|MCTS1|PGRMC1|PLS3|PRDX4|PRPS2|SLC10A3|SLC35A2|UBE2A|WDR45|YIPF6	7.01801830132e-07	0	7.01801830132e-07		0	7.01801830132e-07	
RHEIN_ALL_GLUCOCORTICOID_THERAPY_DN	16	ATRX|BCAP31|CETN2|HMGB3|HPRT1|JADE3|MAGED1|MCTS1|PGK1|PIN4|PRDX4|PRPS2|PSMD10|SMC1A|SMS|TCEAL4	0.000485949497075	0	0.000485949497075		0	0.000485949497075	
RICKMAN_METASTASIS_UP	30	ABCB7|APOOL|ARMCX3|ARMCX6|ATRX|BEX3|BHLHB9|CETN2|MECP2|MMGT1|NKAP|PDZD11|PGRMC1|PSMD10|RBMX2|RLIM|SCFD2|SLC25A14|STAG2|TAF9B|TCEAL4|TCEAL8|THOC2|TMLHE|UPF3B|VBP1|YIPF6|ZBTB33|ZMYM3|ZNF449	1.44418933807e-13	0	1.44418933807e-13		0	1.44418933807e-13	
RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [GoID:GO:0000377; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	14	CSTF2|FMR1|GEMIN8|GPKOW|HNRNPH2|HTATSF1|NONO|PQBP1|RBM10|RBM41|RBMX2|RNF113A|UPF3B|ZRSR2	0.000923381457683	0	0.000923381457683		0	0.000923381457683	
Rat Breast_Giusti09_300genes (19643001-Additional-File2)	9	COX7B|IDH3G|NDUFA1|NDUFB11|PDHA1|PGK1|SH3KBP1|SLC25A3|TMSB4X	0.000968969065929	0	0.000968969065929		0	0.000968969065929	
SHEN_SMARCA2_TARGETS_UP	18	APOOL|ATP6AP2|ATRX|CUL4B|FMR1|HERC2|HNRNPH2|HTATSF1|MECP2|MED14|SMC1A|TAF9B|UBE2A|UBQLN2|UPF3B|USP9X|UTP14C|VBP1	0.000396052917295	0	0.000396052917295		0	0.000396052917295	
TCANNTGAY_SREBP1_01	19	ARMCX3|ARMCX6|ATP6AP1|ATP7A|ATRX|BEX3|CHM|CLCN5|DLG3|FAM50A|GLA|HNRNPH2|MID1|MOSPD1|PLS3|STAG2|TCEAL1|TCEAL8|TCEAL9	0.000372294893352	0	0.000372294893352		0	0.000372294893352	
TMTCGCGANR_UNKNOWN	10	COX7B|DDX3X|IDH3G|OFD1|PRDX4|SMC1A|SSR4|SUV39H1|TRAPPC2|UPF3B	0.000221008098309	0	0.000221008098309		0	0.000221008098309	
USF_02	13	ARMCX6|CLCN5|DDX3X|FMR1|GLA|HNRNPH2|PLS3|PRPS1|RAB9A|RNF128|RRAGB|TIMM8A|UTP14A	0.000677990628325	0	0.000677990628325		0	0.000677990628325	
WANG_RECURRENT_LIVER_CANCER_UP	4	CETN2|CUL4B|FAM122B|RBM41	0.000286235365482	0	0.000286235365482		0	0.000286235365482	
WANG_SMARCE1_TARGETS_DN	19	ACOT9|APOO|ATRX|COX7B|DYNLT3|EBP|EIF1AX|ERCC6L|GLA|HCCS|MID1|PDHA1|PIGA|PRAME|RAB9A|RP2|SCML1|SMS|WWC3	1.99649507196e-05	0	1.99649507196e-05		0	1.99649507196e-05	
chrxp11	62	APEX2|ARAF|ATP6AP2|ATRX|CASK|CCDC22|CDK16|CLCN5|DDX3X|EBP|FAAH2|FAM104B|FAM120C|FTSJ1|FUNDC1|GLOD5|GPKOW|GRIPAP1|HSD17B10|HUWE1|JADE3|KDM5C|KDM6A|KRBOX4|LINC01560|MAGED1|MAGED2|MED14|NBDY|NDUFB11|OTUD5|PHF8|PLP2|PQBP1|PRICKLE3|RBM3|RBM10|RP2|RRAGB|SLC35A2|SLC38A5|SMC1A|SPIN2B|SPIN3|SUV39H1|TIMM17B|TSPYL2|TSR2|UBA1|UBQLN2|USP9X|USP11|USP27X|UXT|WDR13|WDR45|ZNF182|ZNF630|ZNF674|ZNF674-AS1|ZXDA|ZXDB	6.60478907133e-73	0	6.60478907133e-73		0	6.60478907133e-73	
chrxp21	5	DYNLT3|PRRG1|RPGR|TAB3|XK	4.06646576686e-05	0	4.06646576686e-05		0	4.06646576686e-05	
chrxp22	47	ACOT9|APOO|ARSD|ARSE|BCLAF3|CA5B|CA5BP1|CTPS2|EIF1AX|EIF2S3|ELK1|FANCB|GEMIN8|GYG2|HCCS|KLHL15|LOC389906|MBTPS2|MID1|MOSPD2|MSL3|OFD1|PDHA1|PDK3|PHKA2|PIGA|PIR|PNPLA4|POLA1|PRDX4|PRKX|PRPS2|PUDP|RAB9A|RBBP7|RPS6KA3|SCML1|SCML2|SH3KBP1|SMS|SYAP1|TCEANC|TRAPPC2|TXLNG|WWC3|ZFX|ZRSR2	1.33501110047e-53	0	1.33501110047e-53		0	1.33501110047e-53	
chrxq12	5	ABCB7|ATRX|LAS1L|MED12|PHKA1	5.83590825719e-06	0	5.83590825719e-06		0	5.83590825719e-06	
chrxq13	26	ATP7A|BRWD3|CHIC1|DLG3|ERCC6L|GCNA|GJB1|HDAC8|IGBP1|JPX|KIF4A|MED12|NLGN3|NONO|PDZD11|PGK1|PIN4|PJA1|RLIM|SNX12|TAF1|TAF9B|TSIX|XIST|YIPF6|ZMYM3	4.29535651655e-32	0	4.29535651655e-32		0	4.29535651655e-32	
chrxq21	11	APOOL|ARMCX3|ARMCX6|ATRX|CHM|COX7B|FMR1|GLA|POF1B|PRPS1|TMSB4X	1.09802021087e-11	0	1.09802021087e-11		0	1.09802021087e-11	
chrxq22	27	AMMECR1|ARMCX5|BEX3|CENPI|CLDN2|CSTF2|CXORF57|DIAPH2|FAM199X|HNRNPH2|MCTS1|MORC4|NUP62CL|NXT2|PGRMC1|PRPS1|PSMD10|RBM41|RNF128|TBC1D8B|TCEAL1|TCEAL4|TCEAL8|TCEAL9|THOC2|TIMM8A|TMEM164	1.4389280313e-30	0	1.4389280313e-30		0	1.4389280313e-30	
chrxq23	4	ALG13|BHLHB9|CUL4B|ZBTB33	7.91964491866e-05	0	7.91964491866e-05		0	7.91964491866e-05	
chrxq24	14	AIFM1|C1GALT1C1|CUL4B|IL13RA1|LAMP2|NDUFA1|NKAP|NKRF|PLS3|SLC9A6|SLC25A5|SLC25A14|SLC25A43|UBE2A	1.44643641318e-18	0	1.44643641318e-18		0	1.44643641318e-18	
chrxq25	9	AIFM1|ENOX2|OCRL|RAP2C|RNF113A|STAG2|THOC2|UPF3B|XIAP	1.05715937055e-11	0	1.05715937055e-11		0	1.05715937055e-11	
chrxq26	17	ELF4|FAM122B|FAM122C|GPC4|HPRT1|HTATSF1|MMGT1|MOSPD1|PHF6|RBMX2|SLC9A6|SMIM10L2B|UTP14A|ZDHHC9|ZNF75D|ZNF280C|ZNF449	2.16480603021e-18	0	2.16480603021e-18		0	2.16480603021e-18	
chrxq27	4	ATP11C|EMD|FMR1|MTM1	7.91964491866e-05	0	7.91964491866e-05		0	7.91964491866e-05	
chrxq28	40	ABCD1|ATP6AP1|BCAP31|BRCC3|CCNQ|CD99L2|CETN2|CXORF40B|DKC1|DNASE1L1|F8|F8A3|FAM3A|FAM50A|FUNDC2|G6PD|GDI1|HAUS7|HMGB3|IDH3G|IKBKG|IRAK1|LAGE3|MECP2|MTMR1|NAA10|NSDHL|PLXNA3|SLC10A3|SNORA70|SSR4|TAZ|TMEM185A|TMLHE|TREX2|UBL4A|VAMP7|VBP1|VMA21|ZNF275	5.70935866619e-47	0	5.70935866619e-47		0	5.70935866619e-47	
cytoplasmic sequestering of NF-kappaB [GoID:GO:0007253; evidenceTypes:IDA|IMP|NAS]	3	CCDC22|PSMD10|TMSB4X	0.000576065329983	0	0.000576065329983		0	0.000576065329983	
glycosyl compound metabolic process [GoID:GO:1901657; evidenceTypes:IBA|IDA|IEA|IMP|ISS|TAS]	9	CASK|CTPS2|DLG3|GLA|HPRT1|PRPS1|PRPS2|PUDP|UPRT	0.000753169986063	0	0.000753169986063		0	0.000753169986063	
integral component of mitochondrial membrane [GoID:GO:0032592; evidenceTypes:IBA|IDA|IEA|ISS|NAS]	6	APOO|APOOL|ARMCX3|FUNDC1|FUNDC2|TIMM17B	0.000609290303508	0	0.000609290303508		0	0.000609290303508	
intrinsic component of mitochondrial membrane [GoID:GO:0098573; evidenceTypes:IBA|IDA|IEA|ISS|NAS]	6	APOO|APOOL|ARMCX3|FUNDC1|FUNDC2|TIMM17B	0.000665998547659	0	0.000665998547659		0	0.000665998547659	
intrinsic component of organelle membrane [GoID:GO:0031300; evidenceTypes:IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	10	ABCD1|APOO|APOOL|ARMCX3|FUNDC1|FUNDC2|LAMP2|TIMM17B|VAMP7|ZDHHC9	0.000982130476427	0	0.000982130476427		0	0.000982130476427	
mRNA splicing, via spliceosome [GoID:GO:0000398; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	14	CSTF2|FMR1|GEMIN8|GPKOW|HNRNPH2|HTATSF1|NONO|PQBP1|RBM10|RBM41|RBMX2|RNF113A|UPF3B|ZRSR2	0.000923381457683	0	0.000923381457683		0	0.000923381457683	
methylated histone binding [GoID:GO:0035064; evidenceTypes:IBA|IDA|IEA|IMP|IPI|ISS|NAS]	8	ATRX|FMR1|MSL3|PHF8|SPIN2B|SPIN3|SPIN4|TAF1	6.16402664449e-06	0	6.16402664449e-06		0	6.16402664449e-06	
methylation-dependent protein binding [GoID:GO:0140034; evidenceTypes:IBA|IDA|IEA|IMP|IPI|ISS|NAS]	8	ATRX|FMR1|MSL3|PHF8|SPIN2B|SPIN3|SPIN4|TAF1	6.16402664449e-06	0	6.16402664449e-06		0	6.16402664449e-06	
modification-dependent protein binding [GoID:GO:0140030; evidenceTypes:IBA|IDA|IEA|IMP|IPI|ISS|NAS]	10	ATRX|BRCC3|FMR1|IKBKG|MSL3|PHF8|SPIN2B|SPIN3|SPIN4|TAF1	5.95541118863e-05	0	5.95541118863e-05		0	5.95541118863e-05	
nucleoside metabolic process [GoID:GO:0009116; evidenceTypes:IBA|IDA|IEA|IMP|ISS|TAS]	8	CASK|CTPS2|DLG3|HPRT1|PRPS1|PRPS2|PUDP|UPRT	0.000976063036791	0	0.000976063036791		0	0.000976063036791	
ribonucleoside monophosphate metabolic process [GoID:GO:0009161; evidenceTypes:IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	14	ATP7A|CASK|COX7B|DLG3|HPRT1|MECP2|NDUFA1|NDUFB11|PGK1|PRPS1|PRPS2|TAZ|TMSB4X|UPRT	0.000894463677071	0	0.000894463677071		0	0.000894463677071	
transferase complex [GoID:GO:1990234; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	25	BRCC3|CCNQ|CHM|CUL4B|IKBKG|JADE3|KDM6A|KLHL15|LAS1L|MAGT1|MED12|MED14|MSL3|NAA10|PHKA1|PHKA2|PIGA|POLA1|PRPS2|RBBP7|TAF1|TAF9B|UBE2A|UBE2D1|ZDHHC9	0.000988102532722	0	0.000988102532722		0	0.000988102532722	
